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<!DOCTYPE html> <html lang="en"> <head> <title>bertiniTrackHomotopy -- a main method to track using a user-defined homotopy</title> <meta content="text/html; charset=utf-8" http-equiv="Content-Type"> <link type="text/css" rel="stylesheet" href="../../../../Macaulay2/Style/doc.css"> <link rel="stylesheet" href="../../../../Macaulay2/Style/katex/katex.min.css"> <script defer="defer" src="../../../../Macaulay2/Style/katex/katex.min.js"></script> <script defer="defer" src="../../../../Macaulay2/Style/katex/contrib/auto-render.min.js"></script> <script> var macros = { "\\break": "\\\\", "\\ZZ": "\\mathbb{Z}", "\\NN": "\\mathbb{N}", "\\QQ": "\\mathbb{Q}", "\\RR": "\\mathbb{R}", "\\CC": "\\mathbb{C}", "\\PP": "\\mathbb{P}" }, delimiters = [ { left: "$$", right: "$$", display: true}, { left: "\\[", right: "\\]", display: true}, { left: "$", right: "$", display: false}, { left: "\\(", right: "\\)", display: false} ], ignoredTags = [ "kbd", "var", "samp", "script", "noscript", "style", "textarea", "pre", "code", "option" ]; document.addEventListener("DOMContentLoaded", function() { renderMathInElement(document.body, { delimiters: delimiters, macros: macros, ignoredTags: ignoredTags, trust: true }); }); </script> <style>.katex { font-size: 1em; }</style> <script defer="defer" src="../../../../Macaulay2/Style/katex/contrib/copy-tex.min.js"></script> <script defer="defer" src="../../../../Macaulay2/Style/katex/contrib/render-a11y-string.min.js"></script> <script src="../../../../Macaulay2/Style/prism.js"></script> <script>var current_version = '1.25.06';</script> <script src="../../../../Macaulay2/Style/version-select.js"></script> <link type="image/x-icon" rel="icon" href="../../../../Macaulay2/Style/icon.gif"> </head> <body> <div id="buttons"> <div> <a href="https://macaulay2.com/">Macaulay2</a> <span id="version-select-container"></span> » <a title="Macaulay2 documentation" href="../../Macaulay2Doc/html/index.html">Documentation </a> <br><a href="../../Macaulay2Doc/html/_packages_spprovided_spwith_sp__Macaulay2.html">Packages</a> » <span><a title="software for numerical algebraic geometry" href="index.html">Bertini</a> :: <a title="a main method to track using a user-defined homotopy" href="_bertini__Track__Homotopy.html">bertiniTrackHomotopy</a></span> </div> <div class="right"> <form method="get" action="https://www.google.com/search"> <input placeholder="Search" type="text" name="q" value=""> <input type="hidden" name="q" value="site:macaulay2.com/doc"> </form> <a href="_bertini__Track__Homotopy_lp..._cm__Verbose_eq_gt..._rp.html">next</a> | <a href="_bertini__Sample.html">previous</a> | <a href="_bertini__Track__Homotopy_lp..._cm__Verbose_eq_gt..._rp.html">forward</a> | <a href="_bertini__Sample.html">backward</a> | up | <a href="master.html">index</a> | <a href="toc.html">toc</a> </div> </div> <hr> <div> <h1>bertiniTrackHomotopy -- a main method to track using a user-defined homotopy</h1> <ul> <li> <dl class="element"> <dt>Usage: </dt> <dd><code class="language-macaulay2">S0=bertiniTrackHomotopy(t, H, S1)</code></dd> </dl> </li> <li>Inputs: <ul> <li><span><span class="tt">t</span>, <span>a <a title="the class of all ring elements handled by the engine" href="../../Macaulay2Doc/html/___Ring__Element.html">ring element</a></span>, a path variable</span></li> <li><span><span class="tt">H</span>, <span>a <a title="the class of all lists -- {...}" href="../../Macaulay2Doc/html/___List.html">list</a></span>, a list polynomials that define the homotopy with respect to the path variable</span></li> <li><span><span class="tt">S1</span>, <span>a <a title="the class of all lists -- {...}" href="../../Macaulay2Doc/html/___List.html">list</a></span>, a list of solutions to the start system</span></li> </ul> </li> <li><a href="../../Macaulay2Doc/html/_using_spfunctions_spwith_spoptional_spinputs.html">Optional inputs</a>: <ul> <li><span><span class="tt">BertiniInputConfiguration</span> (missing documentation)<!--tag: [bertiniTrackHomotopy, BertiniInputConfiguration]--> <span class="tt"> => </span><span class="tt">...</span>, <span>default value {}</span>, <span></span></span></li> <li><span><a title="optional argument to specify whether to use homogeneous coordinates" href="___Is__Projective.html">IsProjective</a><span class="tt"> => </span><span class="tt">...</span>, <span>default value -1</span>, <span>optional argument to specify whether to use homogeneous coordinates</span></span></li> <li><span><a title="Option to silence additional output" href="_bertini__Track__Homotopy_lp..._cm__Verbose_eq_gt..._rp.html">Verbose</a><span class="tt"> => </span><span class="tt">...</span>, <span>default value false</span>, <span>Option to silence additional output</span></span></li> </ul> </li> <li>Outputs: <ul> <li><span><span class="tt">S0</span>, <span>a <a title="the class of all lists -- {...}" href="../../Macaulay2Doc/html/___List.html">list</a></span>, a list of solutions to the target system</span></li> </ul> </li> </ul> <div> <h2>Description</h2> <div> <p>This method calls <span class="tt">Bertini</span> to track a user-defined homotopy. The user needs to specify the homotopy H, the path variable t, and a list of start solutions S1. Bertini (1) writes the homotopy and start solutions to temporary files, (2) invokes <span class="tt">Bertini</span>'s solver with configuration keyword <span class="tt">UserHomotopy => 1</span> in the affine case and <span class="tt">UserHomotopy => 2</span> in the projective situation, (3) stores the output of <span class="tt">Bertini</span> in a temporary file, and (4) parses a machine readable file to output a list of solutions.</p> </div> <table class="examples"> <tr> <td> <pre><code class="language-macaulay2">i1 : R = CC[x,t]; -- include the path variable in the ring</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i2 : H = { (x^2-1)*t + (x^2-2)*(1-t)};</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i3 : sol1 = point {{1}};</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i4 : sol2 = point {{-1}};</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i5 : S1= { sol1, sol2 };--solutions to H when t=1</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i6 : S0 = bertiniTrackHomotopy (t, H, S1) --solutions to H when t=0 o6 = {{-1.41421}, {1.41421}} o6 : List</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i7 : peek S0_0 o7 = Point{cache => CacheTable{...9...}} Coordinates => {-1.41421}</code></pre> </td> </tr> </table> <div> <p>In the previous example, we solved $x^2-2$ by moving from $x^2-1$ with a linear homotopy. <span class="tt">Bertini</span> tracks homotopies starting at $t=1$ and ending at $t=0$. Final solutions are of the type Point.</p> </div> <table class="examples"> <tr> <td> <pre><code class="language-macaulay2">i8 : R=CC[x,y,t]; -- include the path variable in the ring</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i9 : f1=(x^2-y^2);</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i10 : f2=(2*x^2-3*x*y+5*y^2);</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i11 : H = { f1*t + f2*(1-t)}; --H is a list of polynomials in x,y,t</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i12 : sol1= point{{1,1}}--{{x,y}} coordinates o12 = sol1 o12 : Point</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i13 : sol2= point{{ -1,1}} o13 = sol2 o13 : Point</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i14 : S1={sol1,sol2}--solutions to H when t=1 o14 = {sol1, sol2} o14 : List</code></pre> </td> </tr> <tr> <td> <pre><code class="language-macaulay2">i15 : S0=bertiniTrackHomotopy(t, H, S1, IsProjective=>1) --solutions to H when t=0 o15 = {{-.482114-.646009*ii, .215048-.462233*ii}, {4.1398-4.7253*ii, ----------------------------------------------------------------------- -1.389-3.72253*ii}} o15 : List</code></pre> </td> </tr> </table> <div> <p>Variables must begin with a letter (lowercase or capital) and can only contain letters, numbers, underscores, and square brackets.</p> </div> </div> <div> <div class="waystouse"> <h2>Ways to use <span class="tt">bertiniTrackHomotopy</span>:</h2> <ul> <li><kbd>bertiniTrackHomotopy(RingElement,List,List)</kbd></li> </ul> </div> <div class="waystouse"> <h2>For the programmer</h2> <p>The object <a title="a main method to track using a user-defined homotopy" href="_bertini__Track__Homotopy.html">bertiniTrackHomotopy</a> is <span>a <a title="a type of method function" href="../../Macaulay2Doc/html/___Method__Function__With__Options.html">method function with options</a></span>.</p> </div> <hr> <div class="waystouse"> <p>The source of this document is in <span class="tt">Bertini.m2:2845:0</span>.</p> </div> </div> </div> </body> </html>
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